plu_example.c 14 KB

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  1. /*
  2. * StarPU
  3. * Copyright (C) INRIA 2008-2010 (see AUTHORS file)
  4. *
  5. * This program is free software; you can redistribute it and/or modify
  6. * it under the terms of the GNU Lesser General Public License as published by
  7. * the Free Software Foundation; either version 2.1 of the License, or (at
  8. * your option) any later version.
  9. *
  10. * This program is distributed in the hope that it will be useful, but
  11. * WITHOUT ANY WARRANTY; without even the implied warranty of
  12. * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
  13. *
  14. * See the GNU Lesser General Public License in COPYING.LGPL for more details.
  15. */
  16. #include <stdlib.h>
  17. #include <stdio.h>
  18. #include <string.h>
  19. #include <time.h>
  20. #include <math.h>
  21. #include <starpu.h>
  22. #include "pxlu.h"
  23. //#include "pxlu_kernels.h"
  24. #ifdef HAVE_LIBNUMA
  25. #include <numaif.h>
  26. #endif
  27. static unsigned long size = 16384;
  28. static unsigned nblocks = 16;
  29. static unsigned check = 0;
  30. static unsigned p = 1;
  31. static unsigned q = 1;
  32. static unsigned display = 0;
  33. static unsigned numa = 0;
  34. static size_t allocated_memory = 0;
  35. static size_t allocated_memory_extra = 0;
  36. static starpu_data_handle *dataA_handles;
  37. static TYPE **dataA;
  38. /* In order to implement the distributed LU decomposition, we allocate
  39. * temporary buffers */
  40. #ifdef SINGLE_TMP11
  41. static starpu_data_handle tmp_11_block_handle;
  42. static TYPE *tmp_11_block;
  43. #else
  44. static starpu_data_handle *tmp_11_block_handles;
  45. static TYPE **tmp_11_block;
  46. #endif
  47. #ifdef SINGLE_TMP1221
  48. static starpu_data_handle *tmp_12_block_handles;
  49. static TYPE **tmp_12_block;
  50. static starpu_data_handle *tmp_21_block_handles;
  51. static TYPE **tmp_21_block;
  52. #else
  53. static starpu_data_handle *(tmp_12_block_handles[2]);
  54. static TYPE **(tmp_12_block[2]);
  55. static starpu_data_handle *(tmp_21_block_handles[2]);
  56. static TYPE **(tmp_21_block[2]);
  57. #endif
  58. static void parse_args(int argc, char **argv, int rank)
  59. {
  60. int i;
  61. for (i = 1; i < argc; i++) {
  62. if (strcmp(argv[i], "-size") == 0) {
  63. char *argptr;
  64. size = strtol(argv[++i], &argptr, 10);
  65. }
  66. if (strcmp(argv[i], "-nblocks") == 0) {
  67. char *argptr;
  68. nblocks = strtol(argv[++i], &argptr, 10);
  69. }
  70. if (strcmp(argv[i], "-check") == 0) {
  71. check = 1;
  72. }
  73. if (strcmp(argv[i], "-display") == 0) {
  74. display = 1;
  75. }
  76. if (strcmp(argv[i], "-numa") == 0) {
  77. #ifdef HAVE_LIBNUMA
  78. numa = 1;
  79. #else
  80. if (rank == 0)
  81. fprintf(stderr, "Warning: libnuma is not available\n");
  82. #endif
  83. }
  84. if (strcmp(argv[i], "-p") == 0) {
  85. char *argptr;
  86. p = strtol(argv[++i], &argptr, 10);
  87. }
  88. if (strcmp(argv[i], "-q") == 0) {
  89. char *argptr;
  90. q = strtol(argv[++i], &argptr, 10);
  91. }
  92. }
  93. }
  94. unsigned STARPU_PLU(display_flag)(void)
  95. {
  96. return display;
  97. }
  98. static void fill_block_with_random(TYPE *blockptr, unsigned size, unsigned nblocks)
  99. {
  100. const unsigned block_size = (size/nblocks);
  101. unsigned i, j;
  102. for (i = 0; i < block_size; i++)
  103. for (j = 0; j < block_size; j++)
  104. {
  105. blockptr[j+i*block_size] = (TYPE)starpu_drand48();
  106. }
  107. }
  108. #ifdef SINGLE_TMP11
  109. starpu_data_handle STARPU_PLU(get_tmp_11_block_handle)(void)
  110. {
  111. return tmp_11_block_handle;
  112. }
  113. #else
  114. starpu_data_handle STARPU_PLU(get_tmp_11_block_handle)(unsigned k)
  115. {
  116. return tmp_11_block_handles[k];
  117. }
  118. #endif
  119. #ifdef SINGLE_TMP1221
  120. starpu_data_handle STARPU_PLU(get_tmp_12_block_handle)(unsigned j)
  121. {
  122. return tmp_12_block_handles[j];
  123. }
  124. starpu_data_handle STARPU_PLU(get_tmp_21_block_handle)(unsigned i)
  125. {
  126. return tmp_21_block_handles[i];
  127. }
  128. #else
  129. starpu_data_handle STARPU_PLU(get_tmp_12_block_handle)(unsigned j, unsigned k)
  130. {
  131. return tmp_12_block_handles[k%2][j];
  132. }
  133. starpu_data_handle STARPU_PLU(get_tmp_21_block_handle)(unsigned i, unsigned k)
  134. {
  135. return tmp_21_block_handles[k%2][i];
  136. }
  137. #endif
  138. static unsigned tmp_11_block_is_needed(int rank, unsigned nblocks, unsigned k)
  139. {
  140. return 1;
  141. }
  142. static unsigned tmp_12_block_is_needed(int rank, unsigned nblocks, unsigned j)
  143. {
  144. unsigned i;
  145. for (i = 1; i < nblocks; i++)
  146. {
  147. if (get_block_rank(i, j) == rank)
  148. return 1;
  149. }
  150. return 0;
  151. }
  152. static unsigned tmp_21_block_is_needed(int rank, unsigned nblocks, unsigned i)
  153. {
  154. unsigned j;
  155. for (j = 1; j < nblocks; j++)
  156. {
  157. if (get_block_rank(i, j) == rank)
  158. return 1;
  159. }
  160. return 0;
  161. }
  162. static void init_matrix(int rank)
  163. {
  164. #ifdef HAVE_LIBNUMA
  165. if (numa)
  166. {
  167. fprintf(stderr, "Using INTERLEAVE policy\n");
  168. unsigned long nodemask = ((1<<0)|(1<<1));
  169. int ret = set_mempolicy(MPOL_INTERLEAVE, &nodemask, 3);
  170. if (ret)
  171. perror("set_mempolicy failed");
  172. }
  173. #endif
  174. /* Allocate a grid of data handles, not all of them have to be allocated later on */
  175. dataA_handles = calloc(nblocks*nblocks, sizeof(starpu_data_handle));
  176. dataA = calloc(nblocks*nblocks, sizeof(TYPE *));
  177. allocated_memory_extra += nblocks*nblocks*(sizeof(starpu_data_handle) + sizeof(TYPE *));
  178. size_t blocksize = (size_t)(size/nblocks)*(size/nblocks)*sizeof(TYPE);
  179. /* Allocate all the blocks that belong to this mpi node */
  180. unsigned long i,j;
  181. for (j = 0; j < nblocks; j++)
  182. {
  183. for (i = 0; i < nblocks; i++)
  184. {
  185. TYPE **blockptr = &dataA[j+i*nblocks];
  186. // starpu_data_handle *handleptr = &dataA_handles[j+nblocks*i];
  187. starpu_data_handle *handleptr = &dataA_handles[j+nblocks*i];
  188. if (get_block_rank(i, j) == rank)
  189. {
  190. /* This blocks should be treated by the current MPI process */
  191. /* Allocate and fill it */
  192. starpu_malloc_pinned_if_possible((void **)blockptr, blocksize);
  193. allocated_memory += blocksize;
  194. //fprintf(stderr, "Rank %d : fill block (i = %d, j = %d)\n", rank, i, j);
  195. fill_block_with_random(*blockptr, size, nblocks);
  196. //fprintf(stderr, "Rank %d : fill block (i = %d, j = %d)\n", rank, i, j);
  197. if (i == j)
  198. {
  199. unsigned tmp;
  200. for (tmp = 0; tmp < size/nblocks; tmp++)
  201. {
  202. (*blockptr)[tmp*((size/nblocks)+1)] += (TYPE)10*nblocks;
  203. }
  204. }
  205. /* Register it to StarPU */
  206. starpu_register_blas_data(handleptr, 0,
  207. (uintptr_t)*blockptr, size/nblocks,
  208. size/nblocks, size/nblocks, sizeof(TYPE));
  209. }
  210. else {
  211. *blockptr = STARPU_POISON_PTR;
  212. *handleptr = STARPU_POISON_PTR;
  213. }
  214. }
  215. }
  216. /* Allocate the temporary buffers required for the distributed algorithm */
  217. unsigned k;
  218. /* tmp buffer 11 */
  219. #ifdef SINGLE_TMP11
  220. starpu_malloc_pinned_if_possible((void **)&tmp_11_block, blocksize);
  221. allocated_memory_extra += blocksize;
  222. starpu_register_blas_data(&tmp_11_block_handle, 0, (uintptr_t)tmp_11_block,
  223. size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
  224. #else
  225. tmp_11_block_handles = calloc(nblocks, sizeof(starpu_data_handle));
  226. tmp_11_block = calloc(nblocks, sizeof(TYPE *));
  227. allocated_memory_extra += nblocks*(sizeof(starpu_data_handle) + sizeof(TYPE *));
  228. for (k = 0; k < nblocks; k++)
  229. {
  230. if (tmp_11_block_is_needed(rank, nblocks, k))
  231. {
  232. starpu_malloc_pinned_if_possible((void **)&tmp_11_block[k], blocksize);
  233. allocated_memory_extra += blocksize;
  234. STARPU_ASSERT(tmp_11_block[k]);
  235. starpu_register_blas_data(&tmp_11_block_handles[k], 0,
  236. (uintptr_t)tmp_11_block[k],
  237. size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
  238. }
  239. }
  240. #endif
  241. /* tmp buffers 12 and 21 */
  242. #ifdef SINGLE_TMP1221
  243. tmp_12_block_handles = calloc(nblocks, sizeof(starpu_data_handle));
  244. tmp_21_block_handles = calloc(nblocks, sizeof(starpu_data_handle));
  245. tmp_12_block = calloc(nblocks, sizeof(TYPE *));
  246. tmp_21_block = calloc(nblocks, sizeof(TYPE *));
  247. allocated_memory_extra += 2*nblocks*(sizeof(starpu_data_handle) + sizeof(TYPE *));
  248. #else
  249. for (i = 0; i < 2; i++) {
  250. tmp_12_block_handles[i] = calloc(nblocks, sizeof(starpu_data_handle));
  251. tmp_21_block_handles[i] = calloc(nblocks, sizeof(starpu_data_handle));
  252. tmp_12_block[i] = calloc(nblocks, sizeof(TYPE *));
  253. tmp_21_block[i] = calloc(nblocks, sizeof(TYPE *));
  254. allocated_memory_extra += 2*nblocks*(sizeof(starpu_data_handle) + sizeof(TYPE *));
  255. }
  256. #endif
  257. for (k = 0; k < nblocks; k++)
  258. {
  259. #ifdef SINGLE_TMP1221
  260. if (tmp_12_block_is_needed(rank, nblocks, k))
  261. {
  262. starpu_malloc_pinned_if_possible((void **)&tmp_12_block[k], blocksize);
  263. allocated_memory_extra += blocksize;
  264. STARPU_ASSERT(tmp_12_block[k]);
  265. starpu_register_blas_data(&tmp_12_block_handles[k], 0,
  266. (uintptr_t)tmp_12_block[k],
  267. size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
  268. }
  269. if (tmp_21_block_is_needed(rank, nblocks, k))
  270. {
  271. starpu_malloc_pinned_if_possible((void **)&tmp_21_block[k], blocksize);
  272. allocated_memory_extra += blocksize;
  273. STARPU_ASSERT(tmp_21_block[k]);
  274. starpu_register_blas_data(&tmp_21_block_handles[k], 0,
  275. (uintptr_t)tmp_21_block[k],
  276. size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
  277. }
  278. #else
  279. for (i = 0; i < 2; i++) {
  280. if (tmp_12_block_is_needed(rank, nblocks, k))
  281. {
  282. starpu_malloc_pinned_if_possible((void **)&tmp_12_block[i][k], blocksize);
  283. allocated_memory_extra += blocksize;
  284. STARPU_ASSERT(tmp_12_block[i][k]);
  285. starpu_register_blas_data(&tmp_12_block_handles[i][k], 0,
  286. (uintptr_t)tmp_12_block[i][k],
  287. size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
  288. }
  289. if (tmp_21_block_is_needed(rank, nblocks, k))
  290. {
  291. starpu_malloc_pinned_if_possible((void **)&tmp_21_block[i][k], blocksize);
  292. allocated_memory_extra += blocksize;
  293. STARPU_ASSERT(tmp_21_block[i][k]);
  294. starpu_register_blas_data(&tmp_21_block_handles[i][k], 0,
  295. (uintptr_t)tmp_21_block[i][k],
  296. size/nblocks, size/nblocks, size/nblocks, sizeof(TYPE));
  297. }
  298. }
  299. #endif
  300. }
  301. //display_all_blocks(nblocks, size/nblocks);
  302. }
  303. TYPE *STARPU_PLU(get_block)(unsigned i, unsigned j)
  304. {
  305. return dataA[j+i*nblocks];
  306. }
  307. int get_block_rank(unsigned i, unsigned j)
  308. {
  309. /* Take a 2D block cyclic distribution */
  310. /* NB: p (resp. q) is for "direction" i (resp. j) */
  311. return (j % q) * p + (i % p);
  312. }
  313. starpu_data_handle STARPU_PLU(get_block_handle)(unsigned i, unsigned j)
  314. {
  315. return dataA_handles[j+i*nblocks];
  316. }
  317. static void display_grid(int rank, unsigned nblocks)
  318. {
  319. if (!display)
  320. return;
  321. //if (rank == 0)
  322. {
  323. fprintf(stderr, "2D grid layout (Rank %d): \n", rank);
  324. unsigned i, j;
  325. for (j = 0; j < nblocks; j++)
  326. {
  327. for (i = 0; i < nblocks; i++)
  328. {
  329. TYPE *blockptr = STARPU_PLU(get_block)(i, j);
  330. starpu_data_handle handle = STARPU_PLU(get_block_handle)(i, j);
  331. fprintf(stderr, "%d (data %p handle %p)", get_block_rank(i, j), blockptr, handle);
  332. }
  333. fprintf(stderr, "\n");
  334. }
  335. }
  336. }
  337. int main(int argc, char **argv)
  338. {
  339. int rank;
  340. int world_size;
  341. int thread_support;
  342. /*
  343. * Initialization
  344. */
  345. if (MPI_Init_thread(&argc, &argv, MPI_THREAD_SERIALIZED, &thread_support) != MPI_SUCCESS) {
  346. fprintf(stderr,"MPI_Init_thread failed\n");
  347. exit(1);
  348. }
  349. if (thread_support == MPI_THREAD_FUNNELED)
  350. fprintf(stderr,"Warning: MPI only has funneled thread support, not serialized, hoping this will work\n");
  351. if (thread_support < MPI_THREAD_FUNNELED)
  352. fprintf(stderr,"Warning: MPI does not have thread support!\n");
  353. MPI_Comm_rank(MPI_COMM_WORLD, &rank);
  354. MPI_Comm_size(MPI_COMM_WORLD, &world_size);
  355. srand48((long int)time(NULL));
  356. parse_args(argc, argv, rank);
  357. STARPU_ASSERT(p*q == world_size);
  358. starpu_init(NULL);
  359. starpu_mpi_initialize();
  360. starpu_helper_init_cublas();
  361. int barrier_ret = MPI_Barrier(MPI_COMM_WORLD);
  362. STARPU_ASSERT(barrier_ret == MPI_SUCCESS);
  363. /*
  364. * Problem Init
  365. */
  366. init_matrix(rank);
  367. fprintf(stderr, "Rank %d: allocated (%d + %d) MB = %d MB\n", rank,
  368. allocated_memory/(1024*1024),
  369. allocated_memory_extra/(1024*1024),
  370. (allocated_memory+allocated_memory_extra)/(1024*1024));
  371. display_grid(rank, nblocks);
  372. TYPE *a_r;
  373. // STARPU_PLU(display_data_content)(a_r, size);
  374. TYPE *x, *y;
  375. if (check)
  376. {
  377. x = calloc(size, sizeof(TYPE));
  378. STARPU_ASSERT(x);
  379. y = calloc(size, sizeof(TYPE));
  380. STARPU_ASSERT(y);
  381. if (rank == 0)
  382. {
  383. unsigned ind;
  384. for (ind = 0; ind < size; ind++)
  385. x[ind] = (TYPE)starpu_drand48();
  386. }
  387. a_r = STARPU_PLU(reconstruct_matrix)(size, nblocks);
  388. if (rank == 0)
  389. STARPU_PLU(display_data_content)(a_r, size);
  390. // STARPU_PLU(compute_ax)(size, x, y, nblocks, rank);
  391. }
  392. barrier_ret = MPI_Barrier(MPI_COMM_WORLD);
  393. STARPU_ASSERT(barrier_ret == MPI_SUCCESS);
  394. double timing = STARPU_PLU(plu_main)(nblocks, rank, world_size);
  395. /*
  396. * Report performance
  397. */
  398. int reduce_ret;
  399. double min_timing = timing;
  400. double max_timing = timing;
  401. double sum_timing = timing;
  402. reduce_ret = MPI_Reduce(&timing, &min_timing, 1, MPI_DOUBLE, MPI_MIN, 0, MPI_COMM_WORLD);
  403. STARPU_ASSERT(reduce_ret == MPI_SUCCESS);
  404. reduce_ret = MPI_Reduce(&timing, &max_timing, 1, MPI_DOUBLE, MPI_MAX, 0, MPI_COMM_WORLD);
  405. STARPU_ASSERT(reduce_ret == MPI_SUCCESS);
  406. reduce_ret = MPI_Reduce(&timing, &sum_timing, 1, MPI_DOUBLE, MPI_SUM, 0, MPI_COMM_WORLD);
  407. STARPU_ASSERT(reduce_ret == MPI_SUCCESS);
  408. if (rank == 0)
  409. {
  410. fprintf(stderr, "Computation took: %lf ms\n", max_timing/1000);
  411. fprintf(stderr, "\tMIN : %lf ms\n", min_timing/1000);
  412. fprintf(stderr, "\tMAX : %lf ms\n", max_timing/1000);
  413. fprintf(stderr, "\tAVG : %lf ms\n", sum_timing/(world_size*1000));
  414. unsigned n = size;
  415. double flop = (2.0f*n*n*n)/3.0f;
  416. fprintf(stderr, "Synthetic GFlops : %2.2f\n", (flop/max_timing/1000.0f));
  417. }
  418. /*
  419. * Test Result Correctness
  420. */
  421. TYPE *y2;
  422. if (check)
  423. {
  424. /*
  425. * Compute || A - LU ||
  426. */
  427. STARPU_PLU(compute_lu_matrix)(size, nblocks, a_r);
  428. #if 0
  429. /*
  430. * Compute || Ax - LUx ||
  431. */
  432. unsigned ind;
  433. y2 = calloc(size, sizeof(TYPE));
  434. STARPU_ASSERT(y);
  435. if (rank == 0)
  436. {
  437. for (ind = 0; ind < size; ind++)
  438. {
  439. y2[ind] = (TYPE)0.0;
  440. }
  441. }
  442. STARPU_PLU(compute_lux)(size, x, y2, nblocks, rank);
  443. /* Compute y2 = y2 - y */
  444. CPU_AXPY(size, -1.0, y, 1, y2, 1);
  445. TYPE err = CPU_ASUM(size, y2, 1);
  446. int max = CPU_IAMAX(size, y2, 1);
  447. fprintf(stderr, "(A - LU)X Avg error : %e\n", err/(size*size));
  448. fprintf(stderr, "(A - LU)X Max error : %e\n", y2[max]);
  449. #endif
  450. }
  451. /*
  452. * Termination
  453. */
  454. barrier_ret = MPI_Barrier(MPI_COMM_WORLD);
  455. STARPU_ASSERT(barrier_ret == MPI_SUCCESS);
  456. starpu_helper_shutdown_cublas();
  457. starpu_mpi_shutdown();
  458. starpu_shutdown();
  459. MPI_Finalize();
  460. return 0;
  461. }