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- /* StarPU --- Runtime system for heterogeneous multicore architectures.
- *
- * Copyright (C) 2009-2021 Université de Bordeaux, CNRS (LaBRI UMR 5800), Inria
- * Copyright (C) 2020 Federal University of Rio Grande do Sul (UFRGS)
- *
- * StarPU is free software; you can redistribute it and/or modify
- * it under the terms of the GNU Lesser General Public License as published by
- * the Free Software Foundation; either version 2.1 of the License, or (at
- * your option) any later version.
- *
- * StarPU is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
- *
- * See the GNU Lesser General Public License in COPYING.LGPL for more details.
- */
- /*! \page OfflinePerformanceTools Offline Performance Tools
- To get an idea of what is happening, a lot of performance feedback is available,
- detailed in this chapter. The various informations should be checked for.
- <ul>
- <li>
- What does the Gantt diagram look like? (see \ref CreatingAGanttDiagram)
- <ul>
- <li> If it's mostly green (tasks running in the initial context) or context specific
- color prevailing, then the machine is properly
- utilized, and perhaps the codelets are just slow. Check their performance, see
- \ref PerformanceOfCodelets.
- </li>
- <li> If it's mostly purple (FetchingInput), tasks keep waiting for data
- transfers, do you perhaps have far more communication than computation? Did
- you properly use CUDA streams to make sure communication can be
- overlapped? Did you use data-locality aware schedulers to avoid transfers as
- much as possible?
- </li>
- <li> If it's mostly red (Blocked), tasks keep waiting for dependencies,
- do you have enough parallelism? It might be a good idea to check what the DAG
- looks like (see \ref CreatingADAGWithGraphviz).
- </li>
- <li> If only some workers are completely red (Blocked), for some reason the
- scheduler didn't assign tasks to them. Perhaps the performance model is bogus,
- check it (see \ref PerformanceOfCodelets). Do all your codelets have a
- performance model? When some of them don't, the schedulers switches to a
- greedy algorithm which thus performs badly.
- </li>
- </ul>
- </li>
- </ul>
- You can also use the Temanejo task debugger (see \ref UsingTheTemanejoTaskDebugger) to
- visualize the task graph more easily.
- \section Off-linePerformanceFeedback Off-line Performance Feedback
- \subsection GeneratingTracesWithFxT Generating Traces With FxT
- StarPU can use the FxT library (see
- https://savannah.nongnu.org/projects/fkt/) to generate traces
- with a limited runtime overhead.
- You can get a tarball from http://download.savannah.gnu.org/releases/fkt/?C=M
- Compiling and installing the FxT library in the <c>$FXTDIR</c> path is
- done following the standard procedure:
- \verbatim
- $ ./configure --prefix=$FXTDIR
- $ make
- $ make install
- \endverbatim
- In order to have StarPU to generate traces, StarPU needs be configured again
- after installing FxT, and configuration show:
- \verbatim
- FxT trace enabled: yes
- \endverbatim
- If <c>configure</c> does not find FxT automatically, it can be specified by hand with
- the option \ref with-fxt "--with-fxt" :
- \verbatim
- $ ./configure --with-fxt=$FXTDIR
- \endverbatim
- Or you can simply point the <c>PKG_CONFIG_PATH</c> to
- <c>$FXTDIR/lib/pkgconfig</c>
- When \ref STARPU_FXT_TRACE is set to 1, a trace is generated when StarPU is terminated by calling
- starpu_shutdown(). The trace is a binary file whose name has the form
- <c>prof_file_XXX_YYY</c> where <c>XXX</c> is the user name, and
- <c>YYY</c> is the MPI id of the process that used StarPU (or 0 when running a sequential program).
- One can change
- the name of the file by setting the environnement variable \ref
- STARPU_FXT_SUFFIX, its contents will be used instead of <c>prof_file_XXX</c>.
- This file is saved in the
- <c>/tmp/</c> directory by default, or by the directory specified by
- the environment variable \ref STARPU_FXT_PREFIX.
- The additional \c configure option \ref enable-fxt-lock "--enable-fxt-lock" can
- be used to generate trace events which describes the locks behaviour during
- the execution. It is however very heavy and should not be used unless debugging
- StarPU's internal locking.
- When the FxT trace file <c>prof_file_something</c> has been generated,
- it is possible to generate different trace formats by calling:
- \verbatim
- $ starpu_fxt_tool -i /tmp/prof_file_something
- \endverbatim
- Or alternatively, setting the environment variable \ref STARPU_GENERATE_TRACE
- to <c>1</c> before application execution will make StarPU
- automatically generate all traces at application shutdown. Note that
- if the environment variable \ref STARPU_FXT_PREFIX is set, files will
- be generated in the given directory.
- One can also set the environment variable \ref
- STARPU_GENERATE_TRACE_OPTIONS to specify options, see
- <c>starpu_fxt_tool --help</c>, for example:
- \verbatim
- $ export STARPU_GENERATE_TRACE=1
- $ export STARPU_GENERATE_TRACE_OPTIONS="-no-acquire"
- \endverbatim
- When running a MPI application, \ref STARPU_GENERATE_TRACE will not
- work as expected (each node will try to generate trace files, thus
- mixing outputs...), you have to collect the trace files from the MPI
- nodes, and specify them all on the command <c>starpu_fxt_tool</c>, for
- instance:
- \verbatim
- $ starpu_fxt_tool -i /tmp/prof_file_something*
- \endverbatim
- By default, the generated trace contains all informations. To reduce
- the trace size, various <c>-no-foo</c> options can be passed to
- <c>starpu_fxt_tool</c>, see <c>starpu_fxt_tool --help</c> .
- \subsubsection CreatingAGanttDiagram Creating a Gantt Diagram
- One of the generated files is a trace in the Paje format. The file,
- located in the current directory, is named <c>paje.trace</c>. It can
- be viewed with ViTE (http://vite.gforge.inria.fr/) a trace
- visualizing open-source tool. To open the file <c>paje.trace</c> with
- ViTE, use the following command:
- \verbatim
- $ vite paje.trace
- \endverbatim
- Tasks can be assigned a name (instead of the default \c unknown) by
- filling the optional starpu_codelet::name, or assigning them a
- performance model. The name can also be set with the field
- starpu_task::name or by using \ref STARPU_NAME when calling
- starpu_task_insert().
- Tasks are assigned default colors based on the worker which executed
- them (green for CPUs, yellow/orange/red for CUDAs, blue for OpenCLs, ...).
- To use a different color for every type of task,
- one can specify the option <c>-c</c> to <c>starpu_fxt_tool</c> or in
- \ref STARPU_GENERATE_TRACE_OPTIONS. Tasks can also be given a specific
- color by setting the field starpu_codelet::color or the
- starpu_task::color. Colors are expressed with the following format
- \c 0xRRGGBB (e.g \c 0xFF0000 for red). See
- <c>basic_examples/task_insert_color</c> for examples on how to assign
- colors.
- To get statistics on the time spend in runtime overhead, one can use the
- statistics plugin of ViTE. In Preferences, select Plugins. In "States Type",
- select "Worker State". Then click on "Reload" to update the histogram. The red
- "Idle" percentages are due to lack of parallelism, while the brown "Overhead"
- and "Scheduling" percentages are due to the overhead of the runtime and of the
- scheduler.
- To identify tasks precisely, the application can also set the field
- starpu_task::tag_id or setting \ref STARPU_TAG_ONLY when calling
- starpu_task_insert(). The value of the tag will then show up in the
- trace.
- One can also introduce user-defined events in the diagram thanks to the
- starpu_fxt_trace_user_event_string() function.
- One can also set the iteration number, by just calling starpu_iteration_push()
- at the beginning of submission loops and starpu_iteration_pop() at the end of
- submission loops. These iteration numbers will show up in traces for all tasks
- submitted from there.
- Coordinates can also be given to data with the starpu_data_set_coordinates() or
- starpu_data_set_coordinates_array() function. In the trace, tasks will then be
- assigned the coordinates of the first data they write to.
- Traces can also be inspected by hand by using the tool <c>fxt_print</c>, for instance:
- \verbatim
- $ fxt_print -o -f /tmp/prof_file_something
- \endverbatim
- Timings are in nanoseconds (while timings as seen in ViTE are in milliseconds).
- \subsubsection CreatingADAGWithGraphviz Creating a DAG With Graphviz
- Another generated trace file is a task graph described using the DOT
- language. The file, created in the current directory, is named
- <c>dag.dot</c> file in the current directory.
- It is possible to get a graphical output of the graph by using the
- <c>graphviz</c> library:
- \verbatim
- $ dot -Tpdf dag.dot -o output.pdf
- \endverbatim
- \subsubsection TraceTaskDetails Getting Task Details
- Another generated trace file gives details on the executed tasks. The
- file, created in the current directory, is named <c>tasks.rec</c>. This file
- is in the recutils format, i.e. <c>Field: value</c> lines, and empty lines are used to
- separate each task. This can be used as a convenient input for various ad-hoc
- analysis tools. By default it only contains information about the actual
- execution. Performance models can be obtained by running
- <c>starpu_tasks_rec_complete</c> on it:
- \verbatim
- $ starpu_tasks_rec_complete tasks.rec tasks2.rec
- \endverbatim
- which will add <c>EstimatedTime</c> lines which contain the performance
- model-estimated time (in µs) for each worker starting from 0. Since it needs
- the performance models, it needs to be run the same way as the application
- execution, or at least with <c>STARPU_HOSTNAME</c> set to the hostname of the
- machine used for execution, to get the performance models of that machine.
- Another possibility is to obtain the performance models as an auxiliary <c>perfmodel.rec</c> file, by using the <c>starpu_perfmodel_recdump</c> utility:
- \verbatim
- $ starpu_perfmodel_recdump tasks.rec -o perfmodel.rec
- \endverbatim
- \subsubsection TraceSchedTaskDetails Getting Scheduling Task Details
- The file, <c>sched_tasks.rec</c>, created in the current directory,
- and in the recutils format, gives information about the tasks
- scheduling, and lists the push and pop actions of the scheduler. For
- each action, it gives the timestamp, the job priority and the job id.
- Each action is separated from the next one by empty lines.
- \subsubsection MonitoringActivity Monitoring Activity
- Another generated trace file is an activity trace. The file, created
- in the current directory, is named <c>activity.data</c>. A profile of
- the application showing the activity of StarPU during the execution of
- the program can be generated:
- \verbatim
- $ starpu_workers_activity activity.data
- \endverbatim
- This will create a file named <c>activity.eps</c> in the current directory.
- This picture is composed of two parts.
- The first part shows the activity of the different workers. The green sections
- indicate which proportion of the time was spent executed kernels on the
- processing unit. The red sections indicate the proportion of time spent in
- StartPU: an important overhead may indicate that the granularity may be too
- low, and that bigger tasks may be appropriate to use the processing unit more
- efficiently. The black sections indicate that the processing unit was blocked
- because there was no task to process: this may indicate a lack of parallelism
- which may be alleviated by creating more tasks when it is possible.
- The second part of the picture <c>activity.eps</c> is a graph showing the
- evolution of the number of tasks available in the system during the execution.
- Ready tasks are shown in black, and tasks that are submitted but not
- schedulable yet are shown in grey.
- \subsubsection Animation Getting Modular Schedular Animation
- When using modular schedulers (i.e. schedulers which use a modular architecture,
- and whose name start with "modular-"), the call to
- <c>starpu_fxt_tool</c> will also produce a <c>trace.html</c> file
- which can be viewed in a javascript-enabled web browser. It shows the
- flow of tasks between the components of the modular scheduler.
- \subsubsection TimeBetweenSendRecvDataUse Analyzing Time Between MPI Data Transfer and Use by Tasks
- <c>starpu_fxt_tool</c> produces a file called <c>comms.rec</c> which describes all
- MPI communications. The script <c>starpu_send_recv_data_use.py</c> uses this file
- and <c>tasks.rec</c> in order to produce two graphs: the first one shows durations
- between the reception of data and their usage by a task and the second one plots the
- same graph but with elapsed time between send and usage of a data by the sender.
- \image html trace_recv_use.png
- \image latex trace_recv_use.eps "" width=\textwidth
- \image html trace_send_use.png
- \image latex trace_send_use.eps "" width=\textwidth
- \subsubsection NumberEvents Number of events in trace files
- When launched with the option <c>-number-events</c>, <c>starpu_fxt_tool</c> will
- produce a file named <c>number_events.data</c>. This file contains the number of
- events for each event type. Events are represented with their key. To convert
- event keys to event names, you can use the <c>starpu_fxt_number_events_to_names.py</c>
- script:
- \verbatim
- $ starpu_fxt_number_events_to_names.py number_events.data
- \endverbatim
- \subsection LimitingScopeTrace Limiting The Scope Of The Trace
- For computing statistics, it is useful to limit the trace to a given portion of
- the time of the whole execution. This can be achieved by calling
- \code{.c}
- starpu_fxt_autostart_profiling(0)
- \endcode
- before calling starpu_init(), to
- prevent tracing from starting immediately. Then
- \code{.c}
- starpu_fxt_start_profiling();
- \endcode
- and
- \code{.c}
- starpu_fxt_stop_profiling();
- \endcode
- can be used around the portion of code to be traced. This will show up as marks
- in the trace, and states of workers will only show up for that portion.
- \section PerformanceOfCodelets Performance Of Codelets
- The performance model of codelets (see \ref PerformanceModelExample)
- can be examined by using the tool <c>starpu_perfmodel_display</c>:
- \verbatim
- $ starpu_perfmodel_display -l
- file: <malloc_pinned.hannibal>
- file: <starpu_slu_lu_model_21.hannibal>
- file: <starpu_slu_lu_model_11.hannibal>
- file: <starpu_slu_lu_model_22.hannibal>
- file: <starpu_slu_lu_model_12.hannibal>
- \endverbatim
- Here, the codelets of the example <c>lu</c> are available. We can examine the
- performance of the kernel <c>22</c> (in micro-seconds), which is history-based:
- \verbatim
- $ starpu_perfmodel_display -s starpu_slu_lu_model_22
- performance model for cpu
- # hash size mean dev n
- 57618ab0 19660800 2.851069e+05 1.829369e+04 109
- performance model for cuda_0
- # hash size mean dev n
- 57618ab0 19660800 1.164144e+04 1.556094e+01 315
- performance model for cuda_1
- # hash size mean dev n
- 57618ab0 19660800 1.164271e+04 1.330628e+01 360
- performance model for cuda_2
- # hash size mean dev n
- 57618ab0 19660800 1.166730e+04 3.390395e+02 456
- \endverbatim
- We can see that for the given size, over a sample of a few hundreds of
- execution, the GPUs are about 20 times faster than the CPUs (numbers are in
- us). The standard deviation is extremely low for the GPUs, and less than 10% for
- CPUs.
- This tool can also be used for regression-based performance models. It will then
- display the regression formula, and in the case of non-linear regression, the
- same performance log as for history-based performance models:
- \verbatim
- $ starpu_perfmodel_display -s non_linear_memset_regression_based
- performance model for cpu_impl_0
- Regression : #sample = 1400
- Linear: y = alpha size ^ beta
- alpha = 1.335973e-03
- beta = 8.024020e-01
- Non-Linear: y = a size ^b + c
- a = 5.429195e-04
- b = 8.654899e-01
- c = 9.009313e-01
- # hash size mean stddev n
- a3d3725e 4096 4.763200e+00 7.650928e-01 100
- 870a30aa 8192 1.827970e+00 2.037181e-01 100
- 48e988e9 16384 2.652800e+00 1.876459e-01 100
- 961e65d2 32768 4.255530e+00 3.518025e-01 100
- ...
- \endverbatim
- The same can also be achieved by using StarPU's library API, see
- \ref API_Performance_Model and notably the function
- starpu_perfmodel_load_symbol(). The source code of the tool
- <c>starpu_perfmodel_display</c> can be a useful example.
- An XML output can also be printed by using the <c>-x</c> option:
- \verbatim
- $ tools/starpu_perfmodel_display -x -s non_linear_memset_regression_based
- <?xml version="1.0" encoding="UTF-8"?>
- <!DOCTYPE StarPUPerfmodel SYSTEM "starpu-perfmodel.dtd">
- <!-- symbol non_linear_memset_regression_based -->
- <!-- All times in us -->
- <perfmodel version="45">
- <combination>
- <device type="CPU" id="0" ncores="1"/>
- <implementation id="0">
- <!-- cpu0_impl0 (Comb0) -->
- <!-- time = a size ^b + c -->
- <nl_regression a="5.429195e-04" b="8.654899e-01" c="9.009313e-01"/>
- <entry footprint="a3d3725e" size="4096" flops="0.000000e+00" mean="4.763200e+00" deviation="7.650928e-01" nsample="100"/>
- <entry footprint="870a30aa" size="8192" flops="0.000000e+00" mean="1.827970e+00" deviation="2.037181e-01" nsample="100"/>
- <entry footprint="48e988e9" size="16384" flops="0.000000e+00" mean="2.652800e+00" deviation="1.876459e-01" nsample="100"/>
- <entry footprint="961e65d2" size="32768" flops="0.000000e+00" mean="4.255530e+00" deviation="3.518025e-01" nsample="100"/>
- </implementation>
- </combination>
- </perfmodel>
- \endverbatim
- The tool <c>starpu_perfmodel_plot</c> can be used to draw performance
- models. It writes a <c>.gp</c> file in the current directory, to be
- run with the tool <c>gnuplot</c>, which shows the corresponding curve.
- \verbatim
- $ tools/starpu_perfmodel_plot -s non_linear_memset_regression_based
- $ gnuplot starpu_non_linear_memset_regression_based.gp
- $ gv starpu_non_linear_memset_regression_based.eps
- \endverbatim
- \image html starpu_non_linear_memset_regression_based.png
- \image latex starpu_non_linear_memset_regression_based.eps "" width=\textwidth
- When the field starpu_task::flops is set (or \ref STARPU_FLOPS is passed to
- starpu_task_insert()), <c>starpu_perfmodel_plot</c> can directly draw a GFlops
- curve, by simply adding the <c>-f</c> option:
- \verbatim
- $ starpu_perfmodel_plot -f -s chol_model_11
- \endverbatim
- This will however disable displaying the regression model, for which we can not
- compute GFlops.
- \image html starpu_chol_model_11_type.png
- \image latex starpu_chol_model_11_type.eps "" width=\textwidth
- When the FxT trace file <c>prof_file_something</c> has been generated, it is possible to
- get a profiling of each codelet by calling:
- \verbatim
- $ starpu_fxt_tool -i /tmp/prof_file_something
- $ starpu_codelet_profile distrib.data codelet_name
- \endverbatim
- This will create profiling data files, and a <c>distrib.data.gp</c> file in the current
- directory, which draws the distribution of codelet time over the application
- execution, according to data input size.
- \image html distrib_data.png
- \image latex distrib_data.eps "" width=\textwidth
- This is also available in the tool <c>starpu_perfmodel_plot</c>, by passing it
- the fxt trace:
- \verbatim
- $ starpu_perfmodel_plot -s non_linear_memset_regression_based -i /tmp/prof_file_foo_0
- \endverbatim
- It will produce a <c>.gp</c> file which contains both the performance model
- curves, and the profiling measurements.
- \image html starpu_non_linear_memset_regression_based_2.png
- \image latex starpu_non_linear_memset_regression_based_2.eps "" width=\textwidth
- If you have the statistical tool <c>R</c> installed, you can additionally use
- \verbatim
- $ starpu_codelet_histo_profile distrib.data
- \endverbatim
- Which will create one <c>.pdf</c> file per codelet and per input size, showing a
- histogram of the codelet execution time distribution.
- \image html distrib_data_histo.png
- \image latex distrib_data_histo.eps "" width=\textwidth
- \section EnergyOfCodelets Energy Of Codelets
- A performance model of the energy of codelets can also be recorded thanks to
- the starpu_codelet::energy_model field of the starpu_codelet structure. StarPU usually cannot
- record this automatically since the energy measurement probes are usually not
- fine-grain enough. It is however possible to measure it by writing a program
- that submits batches of tasks, let StarPU measure the energy requirement of
- the batch, and compute an average, see \ref MeasuringEnergyandPower .
- The energy performance model can then be displayed in Joules with
- <c>starpu_perfmodel_display</c> just like the time performance model. The
- <c>starpu_perfmodel_plot</c> needs an extra <c>-e</c> option to display the
- proper unit in the graph:
- \verbatim
- $ tools/starpu_perfmodel_plot -e -s non_linear_memset_regression_based_energy
- $ gnuplot starpu_non_linear_memset_regression_based_energy.gp
- $ gv starpu_non_linear_memset_regression_based_energy.eps
- \endverbatim
- \image html starpu_non_linear_memset_regression_based_energy.png
- \image latex starpu_non_linear_memset_regression_based_energy.eps "" width=\textwidth
- The <c>-f</c> option can also be used to display the performance in terms of GFlop/s/W, i.e. the efficiency:
- \verbatim
- $ tools/starpu_perfmodel_plot -f -e -s non_linear_memset_regression_based_energy
- $ gnuplot starpu_gflops_non_linear_memset_regression_based_energy.gp
- $ gv starpu_gflops_non_linear_memset_regression_based_energy.eps
- \endverbatim
- \image html starpu_gflops_non_linear_memset_regression_based_energy.png
- \image latex starpu_gflops_non_linear_memset_regression_based_energy.eps "" width=\textwidth
- We clearly see here that it is much more energy-efficient to stay in the L3 cache.
- One can combine the two time and energy performance models to draw Watts:
- \verbatim
- $ tools/starpu_perfmodel_plot -se non_linear_memset_regression_based non_linear_memset_regression_based_energy
- $ gnuplot starpu_power_non_linear_memset_regression_based.gp
- $ gv starpu_power_non_linear_memset_regression_based.eps
- \endverbatim
- \image html starpu_power_non_linear_memset_regression_based.png
- \image latex starpu_power_non_linear_memset_regression_based.eps "" width=\textwidth
- \section DataTrace Data trace and tasks length
- It is possible to get statistics about tasks length and data size by using :
- \verbatim
- $ starpu_fxt_data_trace filename [codelet1 codelet2 ... codeletn]
- \endverbatim
- Where filename is the FxT trace file and codeletX the names of the codelets you
- want to profile (if no names are specified, <c>starpu_fxt_data_trace</c> will profile them all).
- This will create a file, <c>data_trace.gp</c> which
- can be executed to get a <c>.eps</c> image of these results. On the image, each point represents a
- task, and each color corresponds to a codelet.
- \image html data_trace.png
- \image latex data_trace.eps "" width=\textwidth
- \section TraceStatistics Trace Statistics
- More than just codelet performance, it is interesting to get statistics over all
- kinds of StarPU states (allocations, data transfers, etc.). This is particularly
- useful to check what may have gone wrong in the accurracy of the SimGrid
- simulation.
- This requires the <c>R</c> statistical tool, with the <c>plyr</c>,
- <c>ggplot2</c> and <c>data.table</c> packages. If your system
- distribution does not have packages for these, one can fetch them from
- <c>CRAN</c>:
- \verbatim
- $ R
- > install.packages("plyr")
- > install.packages("ggplot2")
- > install.packages("data.table")
- > install.packages("knitr")
- \endverbatim
- The <c>pj_dump</c> tool from <c>pajeng</c> is also needed (see
- https://github.com/schnorr/pajeng)
- One can then get textual or <c>.csv</c> statistics over the trace states:
- \verbatim
- $ starpu_paje_state_stats -v native.trace simgrid.trace
- "Value" "Events_native.csv" "Duration_native.csv" "Events_simgrid.csv" "Duration_simgrid.csv"
- "Callback" 220 0.075978 220 0
- "chol_model_11" 10 565.176 10 572.8695
- "chol_model_21" 45 9184.828 45 9170.719
- "chol_model_22" 165 64712.07 165 64299.203
- $ starpu_paje_state_stats native.trace simgrid.trace
- \endverbatim
- An other way to get statistics of StarPU states (without installing <c>R</c> and
- <c>pj_dump</c>) is to use the <c>starpu_trace_state_stats.py</c> script which parses the
- generated <c>trace.rec</c> file instead of the <c>paje.trace</c> file. The output is similar
- to the previous script but it doesn't need any dependencies.
- The different prefixes used in <c>trace.rec</c> are:
- \verbatim
- E: Event type
- N: Event name
- C: Event category
- W: Worker ID
- T: Thread ID
- S: Start time
- \endverbatim
- Here's an example on how to use it:
- \verbatim
- $ starpu_trace_state_stats.py trace.rec | column -t -s ","
- "Name" "Count" "Type" "Duration"
- "Callback" 220 Runtime 0.075978
- "chol_model_11" 10 Task 565.176
- "chol_model_21" 45 Task 9184.828
- "chol_model_22" 165 Task 64712.07
- \endverbatim
- <c>starpu_trace_state_stats.py</c> can also be used to compute the different
- efficiencies. Refer to the usage description to show some examples.
- And one can plot histograms of execution times, of several states for instance:
- \verbatim
- $ starpu_paje_draw_histogram -n chol_model_11,chol_model_21,chol_model_22 native.trace simgrid.trace
- \endverbatim
- and see the resulting pdf file:
- \image html paje_draw_histogram.png
- \image latex paje_draw_histogram.eps "" width=\textwidth
- A quick statistical report can be generated by using:
- \verbatim
- $ starpu_paje_summary native.trace simgrid.trace
- \endverbatim
- it includes gantt charts, execution summaries, as well as state duration charts
- and time distribution histograms.
- Other external Paje analysis tools can be used on these traces, one just needs
- to sort the traces by timestamp order (which not guaranteed to make recording
- more efficient):
- \verbatim
- $ starpu_paje_sort paje.trace
- \endverbatim
- \section PapiCounters PAPI counters
- Performance counter values could be obtained from the PAPI framework if
- <c>./configure</c> detected the libpapi.
- In Debian, packages <c>libpapi-dev</c> and <c>libpapi5.7</c> provide required
- files. Package <c>papi-tools</c> contains a set of useful tools, for example
- <c>papi_avail</c> to see which counters are available.
- To be able to use Papi counters, one may need to reduce the level of the kernel
- parameter <c>kernel.perf_event_paranoid</c> to at least 2. See
- https://www.kernel.org/doc/html/latest/admin-guide/perf-security.html for the
- security impact of this parameter.
- Then one has to set the \ref STARPU_PROFILING environment variable to 1 and
- specify which events to record with the \ref STARPU_PROF_PAPI_EVENTS
- environment variable. For instance:
- \verbatim
- export STARPU_PROFILING=1 STARPU_PROF_PAPI_EVENTS="PAPI_TOT_INS PAPI_TOT_CYC"
- \endverbatim
- The comma can also be used to separate events to monitor.
- In the current simple implementation, only CPU tasks have their events measured
- and require CPUs that support the PAPI events. It is important to note that not
- all events are available on all systems, and general PAPI recommendations
- should be followed.
- The counter values can be accessed using the profiling interface:
- \code{.c}
- task->profiling_info->papi_values
- \endcode
- Also, it can be accessed and/or saved with tracing when using \ref STARPU_FXT_TRACE. With the use of <c>starpu_fxt_tool</c>
- the file <c>papi.rec</c> is generated containing the following triple:
- \verbatim
- Task Id
- Event Id
- Value
- \endverbatim
- External tools like <c>rec2csv</c> can be used to convert this rec file to a <c>csv</c>, where each
- line represents a value for an event for a task.
- \section TheoreticalLowerBoundOnExecutionTime Theoretical Lower Bound On Execution Time
- StarPU can record a trace of what tasks are needed to complete the
- application, and then, by using a linear system, provide a theoretical lower
- bound of the execution time (i.e. with an ideal scheduling).
- The computed bound is not really correct when not taking into account
- dependencies, but for an application which have enough parallelism, it is very
- near to the bound computed with dependencies enabled (which takes a huge lot
- more time to compute), and thus provides a good-enough estimation of the ideal
- execution time.
- \ref TheoreticalLowerBoundOnExecutionTimeExample provides an example on how to
- use this.
- \section TheoreticalLowerBoundOnExecutionTimeExample Theoretical Lower Bound On Execution Time Example
- For kernels with history-based performance models (and provided that
- they are completely calibrated), StarPU can very easily provide a
- theoretical lower bound for the execution time of a whole set of
- tasks. See for instance <c>examples/lu/lu_example.c</c>: before
- submitting tasks, call the function starpu_bound_start(), and after
- complete execution, call starpu_bound_stop().
- starpu_bound_print_lp() or starpu_bound_print_mps() can then be used
- to output a Linear Programming problem corresponding to the schedule
- of your tasks. Run it through <c>lp_solve</c> or any other linear
- programming solver, and that will give you a lower bound for the total
- execution time of your tasks. If StarPU was compiled with the library
- <c>glpk</c> installed, starpu_bound_compute() can be used to solve it
- immediately and get the optimized minimum, in ms. Its parameter
- <c>integer</c> allows to decide whether integer resolution should be
- computed and returned
- The <c>deps</c> parameter tells StarPU whether to take tasks, implicit
- data, and tag dependencies into account. Tags released in a callback
- or similar are not taken into account, only tags associated with a task are.
- It must be understood that the linear programming
- problem size is quadratic with the number of tasks and thus the time to solve it
- will be very long, it could be minutes for just a few dozen tasks. You should
- probably use <c>lp_solve -timeout 1 test.pl -wmps test.mps</c> to convert the
- problem to MPS format and then use a better solver, <c>glpsol</c> might be
- better than <c>lp_solve</c> for instance (the <c>--pcost</c> option may be
- useful), but sometimes doesn't manage to converge. <c>cbc</c> might look
- slower, but it is parallel. For <c>lp_solve</c>, be sure to try at least all the
- <c>-B</c> options. For instance, we often just use <c>lp_solve -cc -B1 -Bb
- -Bg -Bp -Bf -Br -BG -Bd -Bs -BB -Bo -Bc -Bi</c> , and the <c>-gr</c> option can
- also be quite useful. The resulting schedule can be observed by using
- the tool <c>starpu_lp2paje</c>, which converts it into the Paje
- format.
- Data transfer time can only be taken into account when <c>deps</c> is set. Only
- data transfers inferred from implicit data dependencies between tasks are taken
- into account. Other data transfers are assumed to be completely overlapped.
- Setting <c>deps</c> to 0 will only take into account the actual computations
- on processing units. It however still properly takes into account the varying
- performances of kernels and processing units, which is quite more accurate than
- just comparing StarPU performances with the fastest of the kernels being used.
- The <c>prio</c> parameter tells StarPU whether to simulate taking into account
- the priorities as the StarPU scheduler would, i.e. schedule prioritized
- tasks before less prioritized tasks, to check to which extend this results
- to a less optimal solution. This increases even more computation time.
- \section starvz Trace visualization with StarVZ
- Creating views with StarVZ (see: https://github.com/schnorr/starvz) is
- made up of two steps. The initial stage consists of a pre-processing
- of the traces generated by the application, while the second one
- consists of the analysis itself and is carried out with R packages'
- aid. StarVZ is available at CRAN
- (https://cran.r-project.org/package=starvz) and depends on pj_dump
- (from pajeng) and rec2csv (from recutils).
- To download and install StarVZ, it is necessary to have R,
- pajeng, and recutils:
- \verbatim
- # For pj_dump and rec2csv
- apt install -y pajeng recutils
- # For R
- apt install -y r-base libxml2-dev libssl-dev libcurl4-openssl-dev libgit2-dev libboost-dev
- \endverbatim
- To install the StarVZ, the following command can be used:
- \verbatim
- echo "install.packages('starvz', repos = 'https://cloud.r-project.org')" | R --vanilla
- \endverbatim
- To generate traces from an application, it is necessary to set \ref STARPU_GENERATE_TRACE
- and build StarPU with FxT. Then, StarVZ can be used on a folder with
- StarPU FxT traces to produce a default view:
- \verbatim
- export PATH=$(Rscript -e 'cat(system.file("tools/", package = "starvz"), sep="\n")'):$PATH
- starvz /foo/path-to-fxt-files
- \endverbatim
- An example of default view:
- \image html starvz_visu.png
- \image latex starvz_visu.pdf "" width=\textwidth
- One can also use existing trace files (paje.trace, tasks.rec,
- data.rec, papi.rec and dag.dot) skipping the StarVZ internal call to
- starpu_fxt_tool with:
- \verbatim
- starvz --use-paje-trace /foo/path-to-trace-files
- \endverbatim
- Alternatively, each StarVZ step can be executed separately. Step 1 can
- be used on a folder with:
- \verbatim
- starvz -1 /foo/path-to-fxt-files
- \endverbatim
- Then the second step can be
- executed directly in R. StarVZ enables a set of different plots that
- can be configured on a .yaml file. A default file is provided
- (<c>default.yaml</c>); also, the options can be changed directly in
- R.
- \verbatim
- library(starvz)
- library(dplyr)
- dtrace <- starvz_read("./", selective = FALSE)
- # show idleness ratio
- dtrace$config$st$idleness = TRUE
- # show ABE bound
- dtrace$config$st$abe$active = TRUE
- # find the last task with dplyr
- dtrace$config$st$tasks$list = dtrace$Application %>% filter(End == max(End)) %>% .$JobId
- # show last task dependencies
- dtrace$config$st$tasks$active = TRUE
- dtrace$config$st$tasks$levels = 50
- plot <- starvz_plot(dtrace)
- \endverbatim
- An example of visualization follows:
- \image html starvz_visu_r.png
- \image latex starvz_visu_r.pdf "" width=\textwidth
- \section EclipsePlugin Eclipse Plugin
- The StarPU Eclipse Plugin provides the ability to generate the different traces directly from the Eclipse IDE.
- After executing the StarPU application (C/C++), one can use the StarPU plugin to generate and visualise the task graph of the application. The StarPU plugin eclipse is either available through the icons in the upper toolbar, or from the dropdown menu StarPU.
- \image html plugin_eclipse.png
- \image latex plugin_eclipse.pdf "" width=\textwidth
- To start, one first need to run the <c>StarPU FxT tool</c>, either through the FxT icon of the toolbar, or from the menu StarPU.
- To generate traces from the application, it is necessary to set \ref STARPU_FXT_TRACE to 1 and build StarPU with FxT.
- When FxT is enabled, a trace is generated when StarPU is terminated by calling starpu_shutdown().
- \image html fxt_tool.png
- \image latex fxt_tool.pdf "" width=\textwidth
- Setting the environment variable \ref STARPU_FXT_TRACE to 1 before application execution will make StarPU generate the prof_file_XXX_YYY file automatically at application shutdown.
- When the FxT trace file prof_file_something has been generated, it is possible to generate different trace formats by running the first command of StarPU menu, or the FXT icon in the toolbar. A message dialog box is displayed to confirm the generation of the different traces.
- \image html generated_traces.png
- \image latex generated_traces.pdf "" width=\textwidth
- One of the generated files is a trace in the <c>paje format</c>. The file is named \ref paje.trace. It can be viewed with ViTE, which is a trace explorer. To open and visualise the file paje.trace with ViTE, one can select the second command of the StarPU menu, which is named <c>Generate Paje Trace</c>, or click on the second icon named <c>Trace</c> in the toolbar of eclipse.
- \image html paje_trace.png
- \image latex paje_trace.pdf "" width=\textwidth
- \image html vite.png
- \image latex vite.pdf "" width=\textwidth
- Another generated trace file is a task graph described using the DOT language. It is possible to get a graphical output of the graph by calling the <c>graphviz library</c>. To do this, one can click on the third command of StarPU menu. A task graph of the application in (.PNG) format is then generated.
- \image html run_task_graph.png
- \image latex run_task_graph.pdf "" width=\textwidth
- \image html task_graph.png
- \image latex task_graph.pdf "" width=\textwidth
- In StarPU eclipse plugin, one can display the graph task directly from eclipse, or through a web browser. To do this, there is another command named <c> Generate SVG graph</c> in the StarPU menu or HGraph in the toolbar of eclipse.
- From the HTML file, you can see the graph task, and by clicking on a task name, it will open the C file in which the task submission was called.
- \image html svg_graph.png
- \image latex svg_graph.pdf "" width=\textwidth
- \image html hgraph.png
- \image latex hgraph.pdf "" width=\textwidth
- \section MemoryFeedback Memory Feedback
- It is possible to enable memory statistics. To do so, you need to pass
- the option \ref enable-memory-stats "--enable-memory-stats" when running <c>configure</c>. It is then
- possible to call the function starpu_data_display_memory_stats() to
- display statistics about the current data handles registered within StarPU.
- Moreover, statistics will be displayed at the end of the execution on
- data handles which have not been cleared out. This can be disabled by
- setting the environment variable \ref STARPU_MEMORY_STATS to <c>0</c>.
- For example, by adding a call to the function
- starpu_data_display_memory_stats() in the fblock example before
- unpartitioning the data, one will get something
- similar to:
- \verbatim
- $ STARPU_MEMORY_STATS=1 ./examples/filters/fblock
- ...
- #---------------------
- Memory stats :
- #-------
- Data on Node #2
- #-----
- Data : 0x5562074e8670
- Size : 144
- #--
- Data access stats
- /!\ Work Underway
- Node #0
- Direct access : 0
- Loaded (Owner) : 0
- Loaded (Shared) : 0
- Invalidated (was Owner) : 1
- Node #2
- Direct access : 0
- Loaded (Owner) : 1
- Loaded (Shared) : 0
- Invalidated (was Owner) : 0
- #-------
- Data on Node #3
- #-----
- Data : 0x5562074e9338
- Size : 96
- #--
- Data access stats
- /!\ Work Underway
- Node #0
- Direct access : 0
- Loaded (Owner) : 0
- Loaded (Shared) : 0
- Invalidated (was Owner) : 1
- Node #3
- Direct access : 0
- Loaded (Owner) : 1
- Loaded (Shared) : 0
- Invalidated (was Owner) : 0
- #---------------------
- ...
- \endverbatim
- \section DataStatistics Data Statistics
- Different data statistics can be displayed at the end of the execution
- of the application. To enable them, you need to define the environment
- variable \ref STARPU_ENABLE_STATS. When calling
- starpu_shutdown() various statistics will be displayed,
- execution, MSI cache statistics, allocation cache statistics, and data
- transfer statistics. The display can be disabled by setting the
- environment variable \ref STARPU_STATS to <c>0</c>.
- \verbatim
- $ ./examples/cholesky/cholesky_tag
- Computation took (in ms)
- 518.16
- Synthetic GFlops : 44.21
- #---------------------
- MSI cache stats :
- TOTAL MSI stats hit 1622 (66.23 %) miss 827 (33.77 %)
- ...
- \endverbatim
- \verbatim
- $ STARPU_STATS=0 ./examples/cholesky/cholesky_tag
- Computation took (in ms)
- 518.16
- Synthetic GFlops : 44.21
- \endverbatim
- // TODO: data transfer stats are similar to the ones displayed when
- // setting STARPU_BUS_STATS
- */
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