mpi_cholesky_distributed.c 7.5 KB

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  1. /* StarPU --- Runtime system for heterogeneous multicore architectures.
  2. *
  3. * Copyright (C) 2009-2011 Université de Bordeaux 1
  4. * Copyright (C) 2010 Mehdi Juhoor <mjuhoor@gmail.com>
  5. * Copyright (C) 2010, 2011 Centre National de la Recherche Scientifique
  6. *
  7. * StarPU is free software; you can redistribute it and/or modify
  8. * it under the terms of the GNU Lesser General Public License as published by
  9. * the Free Software Foundation; either version 2.1 of the License, or (at
  10. * your option) any later version.
  11. *
  12. * StarPU is distributed in the hope that it will be useful, but
  13. * WITHOUT ANY WARRANTY; without even the implied warranty of
  14. * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
  15. *
  16. * See the GNU Lesser General Public License in COPYING.LGPL for more details.
  17. */
  18. #include <starpu_mpi.h>
  19. #include "mpi_cholesky.h"
  20. #include "mpi_cholesky_models.h"
  21. /*
  22. * Create the codelets
  23. */
  24. static struct starpu_codelet cl11 =
  25. {
  26. .where = STARPU_CPU|STARPU_CUDA,
  27. .cpu_func = chol_cpu_codelet_update_u11,
  28. #ifdef STARPU_USE_CUDA
  29. .cuda_func = chol_cublas_codelet_update_u11,
  30. #endif
  31. .nbuffers = 1,
  32. .model = &chol_model_11
  33. };
  34. static struct starpu_codelet cl21 =
  35. {
  36. .where = STARPU_CPU|STARPU_CUDA,
  37. .cpu_func = chol_cpu_codelet_update_u21,
  38. #ifdef STARPU_USE_CUDA
  39. .cuda_func = chol_cublas_codelet_update_u21,
  40. #endif
  41. .nbuffers = 2,
  42. .model = &chol_model_21
  43. };
  44. static struct starpu_codelet cl22 =
  45. {
  46. .where = STARPU_CPU|STARPU_CUDA,
  47. .cpu_func = chol_cpu_codelet_update_u22,
  48. #ifdef STARPU_USE_CUDA
  49. .cuda_func = chol_cublas_codelet_update_u22,
  50. #endif
  51. .nbuffers = 3,
  52. .model = &chol_model_22
  53. };
  54. /* Returns the MPI node number where data indexes index is */
  55. int my_distrib(int x, int y, int nb_nodes)
  56. {
  57. return (x+y) % nb_nodes;
  58. }
  59. /*
  60. * code to bootstrap the factorization
  61. * and construct the DAG
  62. */
  63. static void dw_cholesky(float ***matA, unsigned size, unsigned ld, unsigned nblocks, int rank, int nodes)
  64. {
  65. struct timeval start;
  66. struct timeval end;
  67. starpu_data_handle_t **data_handles;
  68. int x, y;
  69. /* create all the DAG nodes */
  70. unsigned i,j,k;
  71. data_handles = malloc(nblocks*sizeof(starpu_data_handle_t *));
  72. for(x=0 ; x<nblocks ; x++) data_handles[x] = malloc(nblocks*sizeof(starpu_data_handle_t));
  73. starpu_mpi_barrier(MPI_COMM_WORLD);
  74. gettimeofday(&start, NULL);
  75. for(x = 0; x < nblocks ; x++)
  76. {
  77. for (y = 0; y < nblocks; y++)
  78. {
  79. int mpi_rank = my_distrib(x, y, nodes);
  80. if (mpi_rank == rank)
  81. {
  82. //fprintf(stderr, "[%d] Owning data[%d][%d]\n", rank, x, y);
  83. starpu_matrix_data_register(&data_handles[x][y], 0, (uintptr_t)matA[x][y],
  84. ld, size/nblocks, size/nblocks, sizeof(float));
  85. }
  86. /* TODO: make better test to only registering what is needed */
  87. else
  88. {
  89. /* I don't own that index, but will need it for my computations */
  90. //fprintf(stderr, "[%d] Neighbour of data[%d][%d]\n", rank, x, y);
  91. starpu_matrix_data_register(&data_handles[x][y], -1, (uintptr_t)NULL,
  92. ld, size/nblocks, size/nblocks, sizeof(float));
  93. }
  94. if (data_handles[x][y])
  95. {
  96. starpu_data_set_rank(data_handles[x][y], mpi_rank);
  97. starpu_data_set_tag(data_handles[x][y], (y*nblocks)+x);
  98. }
  99. }
  100. }
  101. for (k = 0; k < nblocks; k++)
  102. {
  103. int prio = STARPU_DEFAULT_PRIO;
  104. if (!noprio) prio = STARPU_MAX_PRIO;
  105. starpu_mpi_insert_task(MPI_COMM_WORLD, &cl11,
  106. STARPU_PRIORITY, prio,
  107. STARPU_RW, data_handles[k][k],
  108. 0);
  109. for (j = k+1; j<nblocks; j++)
  110. {
  111. prio = STARPU_DEFAULT_PRIO;
  112. if (!noprio&& (j == k+1)) prio = STARPU_MAX_PRIO;
  113. starpu_mpi_insert_task(MPI_COMM_WORLD, &cl21,
  114. STARPU_PRIORITY, prio,
  115. STARPU_R, data_handles[k][k],
  116. STARPU_RW, data_handles[k][j],
  117. 0);
  118. for (i = k+1; i<nblocks; i++)
  119. {
  120. if (i <= j)
  121. {
  122. prio = STARPU_DEFAULT_PRIO;
  123. if (!noprio && (i == k + 1) && (j == k +1) ) prio = STARPU_MAX_PRIO;
  124. starpu_mpi_insert_task(MPI_COMM_WORLD, &cl22,
  125. STARPU_PRIORITY, prio,
  126. STARPU_R, data_handles[k][i],
  127. STARPU_R, data_handles[k][j],
  128. STARPU_RW, data_handles[i][j],
  129. 0);
  130. }
  131. }
  132. }
  133. }
  134. starpu_task_wait_for_all();
  135. for(x = 0; x < nblocks ; x++)
  136. {
  137. for (y = 0; y < nblocks; y++)
  138. {
  139. if (data_handles[x][y])
  140. starpu_data_unregister(data_handles[x][y]);
  141. }
  142. free(data_handles[x]);
  143. }
  144. free(data_handles);
  145. starpu_mpi_barrier(MPI_COMM_WORLD);
  146. gettimeofday(&end, NULL);
  147. if (rank == 0)
  148. {
  149. double timing = (double)((end.tv_sec - start.tv_sec)*1000000 + (end.tv_usec - start.tv_usec));
  150. fprintf(stderr, "Computation took (in ms)\n");
  151. fprintf(stdout, "%2.2f\n", timing/1000);
  152. double flop = (1.0f*size*size*size)/3.0f;
  153. fprintf(stderr, "Synthetic GFlops : %2.2f\n", (flop/timing/1000.0f));
  154. }
  155. }
  156. int main(int argc, char **argv)
  157. {
  158. /* create a simple definite positive symetric matrix example
  159. *
  160. * Hilbert matrix : h(i,j) = 1/(i+j+1)
  161. * */
  162. float ***bmat;
  163. int rank, nodes;
  164. parse_args(argc, argv);
  165. struct starpu_conf conf;
  166. starpu_conf_init(&conf);
  167. conf.sched_policy_name = "heft";
  168. conf.calibrate = 1;
  169. starpu_init(&conf);
  170. starpu_mpi_initialize_extended(&rank, &nodes);
  171. starpu_helper_cublas_init();
  172. unsigned i,j,x,y;
  173. bmat = malloc(nblocks * sizeof(float *));
  174. for(x=0 ; x<nblocks ; x++)
  175. {
  176. bmat[x] = malloc(nblocks * sizeof(float *));
  177. for(y=0 ; y<nblocks ; y++)
  178. {
  179. int mpi_rank = my_distrib(x, y, nodes);
  180. if (mpi_rank == rank)
  181. {
  182. starpu_malloc((void **)&bmat[x][y], BLOCKSIZE*BLOCKSIZE*sizeof(float));
  183. for (i = 0; i < BLOCKSIZE; i++)
  184. {
  185. for (j = 0; j < BLOCKSIZE; j++)
  186. {
  187. bmat[x][y][j +i*BLOCKSIZE] = (1.0f/(1.0f+(i+(x*BLOCKSIZE)+j+(y*BLOCKSIZE)))) + ((i+(x*BLOCKSIZE) == j+(y*BLOCKSIZE))?1.0f*size:0.0f);
  188. //mat[j +i*size] = ((i == j)?1.0f*size:0.0f);
  189. }
  190. }
  191. }
  192. }
  193. }
  194. dw_cholesky(bmat, size, size/nblocks, nblocks, rank, nodes);
  195. starpu_mpi_shutdown();
  196. for(x=0 ; x<nblocks ; x++)
  197. {
  198. for(y=0 ; y<nblocks ; y++)
  199. {
  200. int mpi_rank = my_distrib(x, y, nodes);
  201. if (mpi_rank == rank)
  202. {
  203. starpu_free((void *)bmat[x][y]);
  204. }
  205. }
  206. free(bmat[x]);
  207. }
  208. free(bmat);
  209. starpu_helper_cublas_shutdown();
  210. starpu_shutdown();
  211. return 0;
  212. }