cholesky_implicit.c 6.7 KB

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  1. /* StarPU --- Runtime system for heterogeneous multicore architectures.
  2. *
  3. * Copyright (C) 2009, 2010, 2011 Université de Bordeaux 1
  4. * Copyright (C) 2010 Mehdi Juhoor <mjuhoor@gmail.com>
  5. * Copyright (C) 2010, 2011 Centre National de la Recherche Scientifique
  6. * Copyright (C) 2011 INRIA
  7. *
  8. * StarPU is free software; you can redistribute it and/or modify
  9. * it under the terms of the GNU Lesser General Public License as published by
  10. * the Free Software Foundation; either version 2.1 of the License, or (at
  11. * your option) any later version.
  12. *
  13. * StarPU is distributed in the hope that it will be useful, but
  14. * WITHOUT ANY WARRANTY; without even the implied warranty of
  15. * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
  16. *
  17. * See the GNU Lesser General Public License in COPYING.LGPL for more details.
  18. */
  19. #include "cholesky.h"
  20. /*
  21. * Create the codelets
  22. */
  23. static starpu_codelet cl11 =
  24. {
  25. .where = STARPU_CPU|STARPU_CUDA,
  26. .type = STARPU_SEQ,
  27. .cpu_func = chol_cpu_codelet_update_u11,
  28. #ifdef STARPU_USE_CUDA
  29. .cuda_func = chol_cublas_codelet_update_u11,
  30. #endif
  31. .nbuffers = 1,
  32. .model = &chol_model_11
  33. };
  34. static starpu_codelet cl21 =
  35. {
  36. .where = STARPU_CPU|STARPU_CUDA,
  37. .type = STARPU_SEQ,
  38. .cpu_func = chol_cpu_codelet_update_u21,
  39. #ifdef STARPU_USE_CUDA
  40. .cuda_func = chol_cublas_codelet_update_u21,
  41. #endif
  42. .nbuffers = 2,
  43. .model = &chol_model_21
  44. };
  45. static starpu_codelet cl22 =
  46. {
  47. .where = STARPU_CPU|STARPU_CUDA,
  48. .type = STARPU_SEQ,
  49. .max_parallelism = INT_MAX,
  50. .cpu_func = chol_cpu_codelet_update_u22,
  51. #ifdef STARPU_USE_CUDA
  52. .cuda_func = chol_cublas_codelet_update_u22,
  53. #endif
  54. .nbuffers = 3,
  55. .model = &chol_model_22
  56. };
  57. /*
  58. * code to bootstrap the factorization
  59. * and construct the DAG
  60. */
  61. static void callback_turn_spmd_on(void *arg __attribute__ ((unused)))
  62. {
  63. cl22.type = STARPU_SPMD;
  64. }
  65. static double _cholesky(starpu_data_handle dataA, unsigned nblocks, double *timing)
  66. {
  67. struct timeval start;
  68. struct timeval end;
  69. unsigned i,j,k;
  70. int prio_level = noprio?STARPU_DEFAULT_PRIO:STARPU_MAX_PRIO;
  71. gettimeofday(&start, NULL);
  72. /* create all the DAG nodes */
  73. for (k = 0; k < nblocks; k++)
  74. {
  75. starpu_data_handle sdatakk = starpu_data_get_sub_data(dataA, 2, k, k);
  76. starpu_insert_task(&cl11,
  77. STARPU_PRIORITY, prio_level,
  78. STARPU_RW, sdatakk,
  79. STARPU_CALLBACK, (k == 3*nblocks/4)?callback_turn_spmd_on:NULL,
  80. 0);
  81. for (j = k+1; j<nblocks; j++)
  82. {
  83. starpu_data_handle sdatakj = starpu_data_get_sub_data(dataA, 2, k, j);
  84. starpu_insert_task(&cl21,
  85. STARPU_PRIORITY, (j == k+1)?prio_level:STARPU_DEFAULT_PRIO,
  86. STARPU_R, sdatakk,
  87. STARPU_RW, sdatakj,
  88. 0);
  89. for (i = k+1; i<nblocks; i++)
  90. {
  91. if (i <= j)
  92. {
  93. starpu_data_handle sdataki = starpu_data_get_sub_data(dataA, 2, k, i);
  94. starpu_data_handle sdataij = starpu_data_get_sub_data(dataA, 2, i, j);
  95. starpu_insert_task(&cl22,
  96. STARPU_PRIORITY, ((i == k+1) && (j == k+1))?prio_level:STARPU_DEFAULT_PRIO,
  97. STARPU_R, sdataki,
  98. STARPU_R, sdatakj,
  99. STARPU_RW, sdataij,
  100. 0);
  101. }
  102. }
  103. }
  104. }
  105. starpu_task_wait_for_all();
  106. starpu_data_unpartition(dataA, 0);
  107. gettimeofday(&end, NULL);
  108. (*timing) = (double)((end.tv_sec - start.tv_sec)*1000000 + (end.tv_usec - start.tv_usec));
  109. unsigned long n = starpu_matrix_get_nx(dataA);
  110. double flop = (1.0f*n*n*n)/3.0f;
  111. double gflops = (flop/(*timing)/1000.0f);
  112. (*timing) /= 1000000.0f; //sec
  113. // (*timing) /= 60.0f; //min
  114. return gflops;
  115. }
  116. static double cholesky(float *matA, unsigned size, unsigned ld, unsigned nblocks, double *timing)
  117. {
  118. starpu_data_handle dataA;
  119. /* monitor and partition the A matrix into blocks :
  120. * one block is now determined by 2 unsigned (i,j) */
  121. starpu_matrix_data_register(&dataA, 0, (uintptr_t)matA, ld, size, size, sizeof(float));
  122. struct starpu_data_filter f = {
  123. .filter_func = starpu_vertical_block_filter_func,
  124. .nchildren = nblocks
  125. };
  126. struct starpu_data_filter f2 = {
  127. .filter_func = starpu_block_filter_func,
  128. .nchildren = nblocks
  129. };
  130. starpu_data_map_filters(dataA, 2, &f, &f2);
  131. double gflops = _cholesky(dataA, nblocks, timing);
  132. starpu_data_unregister(dataA);
  133. return gflops;
  134. }
  135. double run_cholesky_implicit(int start, int argc, char **argv, double *timing, pthread_barrier_t *barrier)
  136. {
  137. /* create a simple definite positive symetric matrix example
  138. *
  139. * Hilbert matrix : h(i,j) = 1/(i+j+1)
  140. * */
  141. unsigned size = 4 * 1024;
  142. unsigned nblocks = 16;
  143. parse_args_ctx(start, argc, argv, &size, &nblocks);
  144. // starpu_init(NULL);
  145. // starpu_helper_cublas_init();
  146. float *mat;
  147. starpu_malloc((void **)&mat, (size_t)size*size*sizeof(float));
  148. unsigned i,j;
  149. for (i = 0; i < size; i++)
  150. {
  151. for (j = 0; j < size; j++)
  152. {
  153. mat[j +i*size] = (1.0f/(1.0f+i+j)) + ((i == j)?1.0f*size:0.0f);
  154. //mat[j +i*size] = ((i == j)?1.0f*size:0.0f);
  155. }
  156. }
  157. //#define PRINT_OUTPUT
  158. #ifdef PRINT_OUTPUT
  159. printf("Input :\n");
  160. for (j = 0; j < size; j++)
  161. {
  162. for (i = 0; i < size; i++)
  163. {
  164. if (i <= j) {
  165. printf("%2.2f\t", mat[j +i*size]);
  166. }
  167. else {
  168. printf(".\t");
  169. }
  170. }
  171. printf("\n");
  172. }
  173. #endif
  174. double gflops = cholesky(mat, size, size, nblocks, timing);
  175. #ifdef PRINT_OUTPUT
  176. printf("Results :\n");
  177. for (j = 0; j < size; j++)
  178. {
  179. for (i = 0; i < size; i++)
  180. {
  181. if (i <= j) {
  182. printf("%2.2f\t", mat[j +i*size]);
  183. }
  184. else {
  185. printf(".\t");
  186. mat[j+i*size] = 0.0f; // debug
  187. }
  188. }
  189. printf("\n");
  190. }
  191. #endif
  192. if (check)
  193. {
  194. fprintf(stderr, "compute explicit LLt ...\n");
  195. for (j = 0; j < size; j++)
  196. {
  197. for (i = 0; i < size; i++)
  198. {
  199. if (i > j) {
  200. mat[j+i*size] = 0.0f; // debug
  201. }
  202. }
  203. }
  204. float *test_mat = malloc(size*size*sizeof(float));
  205. STARPU_ASSERT(test_mat);
  206. SSYRK("L", "N", size, size, 1.0f,
  207. mat, size, 0.0f, test_mat, size);
  208. fprintf(stderr, "comparing results ...\n");
  209. #ifdef PRINT_OUTPUT
  210. for (j = 0; j < size; j++)
  211. {
  212. for (i = 0; i < size; i++)
  213. {
  214. if (i <= j) {
  215. printf("%2.2f\t", test_mat[j +i*size]);
  216. }
  217. else {
  218. printf(".\t");
  219. }
  220. }
  221. printf("\n");
  222. }
  223. #endif
  224. for (j = 0; j < size; j++)
  225. {
  226. for (i = 0; i < size; i++)
  227. {
  228. if (i <= j) {
  229. float orig = (1.0f/(1.0f+i+j)) + ((i == j)?1.0f*size:0.0f);
  230. float err = abs(test_mat[j +i*size] - orig);
  231. if (err > 0.00001) {
  232. fprintf(stderr, "Error[%d, %d] --> %2.2f != %2.2f (err %2.2f)\n", i, j, test_mat[j +i*size], orig, err);
  233. assert(0);
  234. }
  235. }
  236. }
  237. }
  238. }
  239. starpu_free((void *)mat);
  240. // starpu_helper_cublas_shutdown();
  241. // starpu_shutdown();
  242. return gflops;
  243. }