mpi.doxy 19 KB

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  1. /*
  2. * This file is part of the StarPU Handbook.
  3. * Copyright (C) 2009--2011 Universit@'e de Bordeaux
  4. * Copyright (C) 2010, 2011, 2012, 2013, 2014, 2015 Centre National de la Recherche Scientifique
  5. * Copyright (C) 2011, 2012 Institut National de Recherche en Informatique et Automatique
  6. * See the file version.doxy for copying conditions.
  7. */
  8. /*! \defgroup API_MPI_Support MPI Support
  9. @name Initialisation
  10. \ingroup API_MPI_Support
  11. \def STARPU_USE_MPI
  12. \ingroup API_MPI_Support
  13. This macro is defined when StarPU has been installed with MPI
  14. support. It should be used in your code to detect the availability of
  15. MPI.
  16. \fn int starpu_mpi_init_comm(int *argc, char ***argv, int initialize_mpi, MPI_Comm comm)
  17. \ingroup API_MPI_Support
  18. Initializes the starpumpi library with the given communicator.
  19. \p initialize_mpi indicates if MPI should be initialized or not by StarPU.
  20. If the value is not 0, MPI will be initialized by calling
  21. <c>MPI_Init_Thread(argc, argv, MPI_THREAD_SERIALIZED, ...)</c>.
  22. \fn int starpu_mpi_init(int *argc, char ***argv, int initialize_mpi)
  23. \ingroup API_MPI_Support
  24. Call starpu_mpi_init_comm() with the MPI communicator MPI_COMM_WORLD.
  25. \fn int starpu_mpi_initialize(void)
  26. \deprecated
  27. \ingroup API_MPI_Support
  28. This function has been made deprecated. One should use instead the
  29. function starpu_mpi_init(). This function does not call MPI_Init(), it
  30. should be called beforehand.
  31. \fn int starpu_mpi_initialize_extended(int *rank, int *world_size)
  32. \deprecated
  33. \ingroup API_MPI_Support
  34. This function has been made deprecated. One should use instead the
  35. function starpu_mpi_init(). MPI will be initialized by starpumpi by
  36. calling <c>MPI_Init_Thread(argc, argv, MPI_THREAD_SERIALIZED,
  37. ...)</c>.
  38. \fn int starpu_mpi_shutdown(void)
  39. \ingroup API_MPI_Support
  40. Cleans the starpumpi library. This must be called between calling
  41. starpu_mpi functions and starpu_shutdown(). MPI_Finalize() will be
  42. called if StarPU-MPI has been initialized by starpu_mpi_init().
  43. \fn void starpu_mpi_comm_amounts_retrieve(size_t *comm_amounts)
  44. \ingroup API_MPI_Support
  45. Retrieve the current amount of communications from the current node in
  46. the array \p comm_amounts which must have a size greater or equal to
  47. the world size. Communications statistics must be enabled (see
  48. \ref STARPU_COMM_STATS).
  49. @name Communication
  50. \anchor MPIPtpCommunication
  51. \ingroup API_MPI_Support
  52. \fn int starpu_mpi_send(starpu_data_handle_t data_handle, int dest, int mpi_tag, MPI_Comm comm)
  53. \ingroup API_MPI_Support
  54. Performs a standard-mode, blocking send of \p data_handle to the node
  55. \p dest using the message tag \p mpi_tag within the communicator \p
  56. comm.
  57. \fn int starpu_mpi_recv(starpu_data_handle_t data_handle, int source, int mpi_tag, MPI_Comm comm, MPI_Status *status)
  58. \ingroup API_MPI_Support
  59. Performs a standard-mode, blocking receive in \p data_handle from the
  60. node \p source using the message tag \p mpi_tag within the
  61. communicator \p comm.
  62. \fn int starpu_mpi_isend(starpu_data_handle_t data_handle, starpu_mpi_req *req, int dest, int mpi_tag, MPI_Comm comm)
  63. \ingroup API_MPI_Support
  64. Posts a standard-mode, non blocking send of \p data_handle to the node
  65. \p dest using the message tag \p mpi_tag within the communicator \p
  66. comm. After the call, the pointer to the request \p req can be used to
  67. test or to wait for the completion of the communication.
  68. \fn int starpu_mpi_irecv(starpu_data_handle_t data_handle, starpu_mpi_req *req, int source, int mpi_tag, MPI_Comm comm)
  69. \ingroup API_MPI_Support
  70. Posts a nonblocking receive in \p data_handle from the node \p source
  71. using the message tag \p mpi_tag within the communicator \p comm.
  72. After the call, the pointer to the request \p req can be used to test
  73. or to wait for the completion of the communication.
  74. \fn int starpu_mpi_isend_detached(starpu_data_handle_t data_handle, int dest, int mpi_tag, MPI_Comm comm, void (*callback)(void *), void *arg)
  75. \ingroup API_MPI_Support
  76. Posts a standard-mode, non blocking send of \p data_handle to the node
  77. \p dest using the message tag \p mpi_tag within the communicator \p
  78. comm. On completion, the \p callback function is called with the
  79. argument \p arg.
  80. Similarly to the pthread detached functionality, when a detached
  81. communication completes, its resources are automatically released back
  82. to the system, there is no need to test or to wait for the completion
  83. of the request.
  84. \fn int starpu_mpi_irecv_detached(starpu_data_handle_t data_handle, int source, int mpi_tag, MPI_Comm comm, void (*callback)(void *), void *arg)
  85. \ingroup API_MPI_Support
  86. Posts a nonblocking receive in \p data_handle from the node \p source
  87. using the message tag \p mpi_tag within the communicator \p comm. On
  88. completion, the \p callback function is called with the argument \p
  89. arg.
  90. Similarly to the pthread detached functionality, when a detached
  91. communication completes, its resources are automatically released back
  92. to the system, there is no need to test or to wait for the completion
  93. of the request.
  94. \fn int starpu_mpi_irecv_detached_sequential_consistency(starpu_data_handle_t data_handle, int source, int mpi_tag, MPI_Comm comm, void (*callback)(void *), void *arg, int sequential_consistency)
  95. \ingroup API_MPI_Support
  96. Posts a nonblocking receive in \p data_handle from the node \p source
  97. using the message tag \p mpi_tag within the communicator \p comm. On
  98. completion, the \p callback function is called with the argument \p
  99. arg.
  100. The parameter \p sequential_consistency allows to enable or disable
  101. the sequential consistency for \p data handle (sequential consistency
  102. will be enabled or disabled based on the value of the parameter \p
  103. sequential_consistency and the value of the sequential consistency
  104. defined for \p data_handle).
  105. Similarly to the pthread detached functionality, when a detached
  106. communication completes, its resources are automatically released back
  107. to the system, there is no need to test or to wait for the completion
  108. of the request.
  109. \fn int starpu_mpi_issend(starpu_data_handle_t data_handle, starpu_mpi_req *req, int dest, int mpi_tag, MPI_Comm comm)
  110. \ingroup API_MPI_Support
  111. Performs a synchronous-mode, non-blocking send of \p data_handle to the node
  112. \p dest using the message tag \p mpi_tag within the communicator \p
  113. comm.
  114. int starpu_mpi_issend_detached(starpu_data_handle_t data_handle, starpu_mpi_req *req, int dest, int mpi_tag, MPI_Comm comm, void (*callback)(void *), void *arg)
  115. \ingroup API_MPI_Support
  116. Performs a synchronous-mode, non-blocking send of \p data_handle to the node
  117. \p dest using the message tag \p mpi_tag within the communicator \p
  118. comm. On completion, the \p callback function is called with the argument \p
  119. arg.
  120. Similarly to the pthread detached functionality, when a detached
  121. communication completes, its resources are automatically released back
  122. to the system, there is no need to test or to wait for the completion
  123. of the request.
  124. \fn int starpu_mpi_wait(starpu_mpi_req *req, MPI_Status *status)
  125. \ingroup API_MPI_Support
  126. Returns when the operation identified by request \p req is complete.
  127. \fn int starpu_mpi_test(starpu_mpi_req *req, int *flag, MPI_Status *status)
  128. \ingroup API_MPI_Support
  129. If the operation identified by \p req is complete, set \p flag to 1.
  130. The \p status object is set to contain information on the completed
  131. operation.
  132. \fn int starpu_mpi_barrier(MPI_Comm comm)
  133. \ingroup API_MPI_Support
  134. Blocks the caller until all group members of the communicator \p comm
  135. have called it.
  136. \fn int starpu_mpi_isend_detached_unlock_tag(starpu_data_handle_t data_handle, int dest, int mpi_tag, MPI_Comm comm, starpu_tag_t tag)
  137. \ingroup API_MPI_Support
  138. Posts a standard-mode, non blocking send of \p data_handle to the node
  139. \p dest using the message tag \p mpi_tag within the communicator \p
  140. comm. On completion, \p tag is unlocked.
  141. \fn int starpu_mpi_irecv_detached_unlock_tag(starpu_data_handle_t data_handle, int source, int mpi_tag, MPI_Comm comm, starpu_tag_t tag)
  142. \ingroup API_MPI_Support
  143. Posts a nonblocking receive in \p data_handle from the node \p source
  144. using the message tag \p mpi_tag within the communicator \p comm. On
  145. completion, \p tag is unlocked.
  146. \fn int starpu_mpi_isend_array_detached_unlock_tag(unsigned array_size, starpu_data_handle_t *data_handle, int *dest, int *mpi_tag, MPI_Comm *comm, starpu_tag_t tag)
  147. \ingroup API_MPI_Support
  148. Posts \p array_size standard-mode, non blocking send. Each post sends
  149. the n-th data of the array \p data_handle to the n-th node of the
  150. array \p dest using the n-th message tag of the array \p mpi_tag
  151. within the n-th communicator of the array \p comm. On completion of
  152. the all the requests, \p tag is unlocked.
  153. \fn int starpu_mpi_irecv_array_detached_unlock_tag(unsigned array_size, starpu_data_handle_t *data_handle, int *source, int *mpi_tag, MPI_Comm *comm, starpu_tag_t tag)
  154. \ingroup API_MPI_Support
  155. Posts \p array_size nonblocking receive. Each post receives in the n-th
  156. data of the array \p data_handle from the n-th node of the array \p
  157. source using the n-th message tag of the array \p mpi_tag within the
  158. n-th communicator of the array \p comm. On completion of the all the
  159. requests, \p tag is unlocked.
  160. \fn int starpu_mpi_get_communication_tag(void)
  161. \ingroup API_MPI_Support
  162. todo
  163. \fn void starpu_mpi_set_communication_tag(int tag)
  164. \ingroup API_MPI_Support
  165. todo
  166. @name Communication Cache
  167. \ingroup API_MPI_Support
  168. \fn int starpu_mpi_cache_is_enabled()
  169. \ingroup API_MPI_Support
  170. Return 1 if the communication cache is enabled, 0 otherwise
  171. \fn int starpu_mpi_cache_set(int enabled)
  172. \ingroup API_MPI_Support
  173. If \p enabled is 1, enable the communication cache. Otherwise, clean the cache if it was enabled and disable it.
  174. \fn void starpu_mpi_cache_flush(MPI_Comm comm, starpu_data_handle_t data_handle)
  175. \ingroup API_MPI_Support
  176. Clear the send and receive communication cache for the data
  177. \p data_handle and invalidate the value. The function has to be called synchronously by all the
  178. MPI nodes. The function does nothing if the cache mechanism is
  179. disabled (see \ref STARPU_MPI_CACHE).
  180. \fn void starpu_mpi_cache_flush_all_data(MPI_Comm comm)
  181. \ingroup API_MPI_Support
  182. Clear the send and receive communication cache for all data and invalidate their values. The
  183. function has to be called synchronously by all the MPI nodes. The
  184. function does nothing if the cache mechanism is disabled (see
  185. \ref STARPU_MPI_CACHE).
  186. @name MPI Insert Task
  187. \anchor MPIInsertTask
  188. \ingroup API_MPI_Support
  189. \fn void starpu_mpi_data_register_comm(starpu_data_handle_t data_handle, int tag, int rank, MPI_Comm comm)
  190. \ingroup API_MPI_Support
  191. Register to MPI a StarPU data handle with the given tag, rank and MPI communicator.
  192. It also automatically clears the MPI communication cache when unregistering the data.
  193. \fn int starpu_mpi_data_register(starpu_data_handle_t handle, int tag, int rank)
  194. \ingroup API_MPI_Support
  195. Register to MPI a StarPU data handle with the given tag, rank and the MPI communicator MPI_COMM_WORLD.
  196. It also automatically clears the MPI communication cache when unregistering the data.
  197. \fn void starpu_mpi_data_set_tag(starpu_data_handle_t handle, int tag)
  198. \ingroup API_MPI_Support
  199. Register to MPI a StarPU data handle with the given tag. No rank will be defined.
  200. It also automatically clears the MPI communication cache when unregistering the data.
  201. \def starpu_data_set_tag
  202. \ingroup API_MPI_Support
  203. Symbol kept for backward compatibility. Calling function starpu_mpi_data_set_tag
  204. \int starpu_mpi_data_set_rank(starpu_data_handle_t handle, int rank)
  205. \ingroup API_MPI_Support
  206. Register to MPI a StarPU data handle with the given rank and the MPI communicator MPI_COMM_WORLD. No tag will be defined.
  207. It also automatically clears the MPI communication cache when unregistering the data.
  208. \def starpu_data_set_rank
  209. \ingroup API_MPI_Support
  210. Symbol kept for backward compatibility. Calling function starpu_mpi_data_set_rank
  211. \fn int starpu_mpi_data_get_rank(starpu_data_handle_t handle)
  212. \ingroup API_MPI_Support
  213. Return the rank of the given data.
  214. \fn int starpu_mpi_data_get_tag(starpu_data_handle_t handle)
  215. \ingroup API_MPI_Support
  216. Return the tag of the given data.
  217. \def STARPU_EXECUTE_ON_NODE
  218. \ingroup API_MPI_Support
  219. this macro is used when calling starpu_mpi_task_insert(), and must be
  220. followed by a integer value which specified the node on which to
  221. execute the codelet.
  222. \def STARPU_EXECUTE_ON_DATA
  223. \ingroup API_MPI_Support
  224. this macro is used when calling starpu_mpi_task_insert(), and must be
  225. followed by a data handle to specify that the node owning the given
  226. data will execute the codelet.
  227. \fn int starpu_mpi_insert_task(MPI_Comm comm, struct starpu_codelet *codelet, ...)
  228. \ingroup API_MPI_Support
  229. This function does the same as the function starpu_mpi_task_insert(). It has been kept to avoid breaking old codes.
  230. \fn int starpu_mpi_task_insert(MPI_Comm comm, struct starpu_codelet *codelet, ...)
  231. \ingroup API_MPI_Support
  232. Create and submit a task corresponding to codelet with the following
  233. arguments. The argument list must be zero-terminated.
  234. The arguments following the codelet are the same types as for the
  235. function starpu_task_insert(). Access modes for data can also be set
  236. with ::STARPU_SSEND to specify the data has to be sent using a
  237. synchronous and non-blocking mode (see starpu_mpi_issend()).
  238. The extra argument
  239. ::STARPU_EXECUTE_ON_NODE followed by an integer allows to specify the
  240. MPI node to execute the codelet. It is also possible to specify that
  241. the node owning a specific data will execute the codelet, by using
  242. ::STARPU_EXECUTE_ON_DATA followed by a data handle.
  243. The internal algorithm is as follows:
  244. <ol>
  245. <li>
  246. Find out which MPI node is going to execute the codelet.
  247. <ul>
  248. <li>If there is only one node owning data in ::STARPU_W mode, it will be selected;
  249. <li>If there is several nodes owning data in ::STARPU_W node, a node will be selected according to a given node selection policy (see ::STARPU_NODE_SELECTION_POLICY or starpu_mpi_node_selection_set_current_policy())
  250. <li>The argument ::STARPU_EXECUTE_ON_NODE followed by an integer can be used to specify the node;
  251. <li>The argument ::STARPU_EXECUTE_ON_DATA followed by a data handle can be used to specify that the node owing the given data will execute the codelet.
  252. </ul>
  253. </li>
  254. <li>
  255. Send and receive data as requested. Nodes owning data which need to be read by the task are sending them to the MPI node which will execute it. The latter receives them.
  256. </li>
  257. <li>
  258. Execute the codelet. This is done by the MPI node selected in the 1st step of the algorithm.
  259. </li>
  260. <li>
  261. If several MPI nodes own data to be written to, send written data back to their owners.
  262. </li>
  263. </ol>
  264. The algorithm also includes a communication cache mechanism that
  265. allows not to send data twice to the same MPI node, unless the data
  266. has been modified. The cache can be disabled (see \ref STARPU_MPI_CACHE).
  267. \fn struct starpu_task *starpu_mpi_task_build(MPI_Comm comm, struct starpu_codelet *codelet, ...)
  268. \ingroup API_MPI_Support
  269. Create a task corresponding to codelet with the following arguments.
  270. The argument list must be zero-terminated. The function performs the
  271. first two steps of the function starpu_mpi_task_insert(). Only the MPI
  272. node selected in the first step of the algorithm will return a valid
  273. task structure which can then be submitted. The function
  274. starpu_mpi_task_post_build() MUST be called after the submission of
  275. the task, with the SAME list of arguments.
  276. \fn int starpu_mpi_task_post_build(MPI_Comm comm, struct starpu_codelet *codelet, ...)
  277. \ingroup API_MPI_Support
  278. This function MUST be called after a call to starpu_mpi_task_build(),
  279. with the SAME list of arguments. It performs the fourth -- last -- step of the algorithm described in
  280. starpu_mpi_task_insert().
  281. \fn void starpu_mpi_get_data_on_node(MPI_Comm comm, starpu_data_handle_t data_handle, int node)
  282. \ingroup API_MPI_Support
  283. Transfer data \p data_handle to MPI node \p node, sending it from its
  284. owner if needed. At least the target node and the owner have to call
  285. the function.
  286. \fn void starpu_mpi_get_data_on_node_detached(MPI_Comm comm, starpu_data_handle_t data_handle, int node, void (*callback)(void*), void *arg)
  287. \ingroup API_MPI_Support
  288. Transfer data \p data_handle to MPI node \p node, sending it from its
  289. owner if needed. At least the target node and the owner have to call
  290. the function. On reception, the \p callback function is called with
  291. the argument \p arg.
  292. @name Node Selection Policy
  293. \anchor MPINodeSelectionPolicy
  294. \ingroup API_MPI_Support
  295. \fn int starpu_mpi_node_selection_get_current_policy()
  296. \ingroup API_MPI_Support
  297. Return the current policy used to select the node which will execute the codelet
  298. \fn int starpu_mpi_node_selection_set_current_policy(int policy)
  299. \ingroup API_MPI_Support
  300. Set the current policy used to select the node which will
  301. execute the codelet. The policy STARPU_MPI_NODE_SELECTION_MOST_R_DATA selects the
  302. node having the most data in R mode so as to minimize the amount of
  303. data to be transfered.
  304. \fn int starpu_mpi_node_selection_register_policy(starpu_mpi_select_node_policy_func_t policy_func)
  305. \ingroup API_MPI_Support
  306. Register a new policy which can then be used when there is several nodes owning data in W mode.
  307. Here an example of function defining a node selection policy.
  308. The codelet will be executed on the node owing the first data with a size bigger than 1M, or on the node
  309. 0 if no data fits the given size.
  310. \code{.c}
  311. int my_node_selection_policy(int me, int nb_nodes, struct starpu_data_descr *descr, int nb_data)
  312. {
  313. // me is the current MPI rank
  314. // nb_nodes is the number of MPI nodes
  315. // descr is the description of the data specified when calling starpu_mpi_task_insert
  316. // nb_data is the number of data in descr
  317. int i;
  318. for(i= 0 ; i<nb_data ; i++)
  319. {
  320. starpu_data_handle_t data = descr[i].handle;
  321. enum starpu_data_access_mode mode = descr[i].mode;
  322. if (mode & STARPU_R)
  323. {
  324. int rank = starpu_data_get_rank(data);
  325. size_t size = starpu_data_get_size(data);
  326. if (size > 1024*1024) return rank;
  327. }
  328. }
  329. return 0;
  330. }
  331. \endcode
  332. \fn int starpu_mpi_node_selection_unregister_policy(int policy)
  333. \ingroup API_MPI_Support
  334. Unregister a previously registered policy.
  335. @name Collective Operations
  336. \anchor MPICollectiveOperations
  337. \ingroup API_MPI_Support
  338. \fn void starpu_mpi_redux_data(MPI_Comm comm, starpu_data_handle_t data_handle)
  339. \ingroup API_MPI_Support
  340. Perform a reduction on the given data. All nodes send the data to its
  341. owner node which will perform a reduction.
  342. \fn int starpu_mpi_scatter_detached(starpu_data_handle_t *data_handles, int count, int root, MPI_Comm comm, void (*scallback)(void *), void *sarg, void (*rcallback)(void *), void *rarg)
  343. \ingroup API_MPI_Support
  344. Scatter data among processes of the communicator based on the
  345. ownership of the data. For each data of the array \p data_handles, the
  346. process \p root sends the data to the process owning this data. Processes
  347. receiving data must have valid data handles to receive them. On
  348. completion of the collective communication, the \p scallback function is
  349. called with the argument \p sarg on the process \p root, the \p
  350. rcallback function is called with the argument \p rarg on any other
  351. process.
  352. \fn int starpu_mpi_gather_detached(starpu_data_handle_t *data_handles, int count, int root, MPI_Comm comm, void (*scallback)(void *), void *sarg, void (*rcallback)(void *), void *rarg)
  353. \ingroup API_MPI_Support
  354. Gather data from the different processes of the communicator onto the
  355. process \p root. Each process owning data handle in the array
  356. \p data_handles will send them to the process \p root. The process \p
  357. root must have valid data handles to receive the data. On completion
  358. of the collective communication, the \p rcallback function is called
  359. with the argument \p rarg on the process root, the \p scallback
  360. function is called with the argument \p sarg on any other process.
  361. */